refactor(cli)!: hard-cut legacy scripts and standardize console runtime

- remove legacy bin/module-*.php and bin/doctor.php entry scripts

- move module/doctor execution into class-based runners under lib/Console

- add stable JSON output for doctor and module:sync

- introduce bin/dev for init/up/down/logs/console/qa workflow

- update DI wiring, phpstan scan config, tests, and docs to new CLI contract

lib/Console/Support/CliAppBootstrap.php

@@ -0,0 +1,55 @@
+<?php
+
+declare(strict_types=1);
+
+namespace MintyPHP\Console\Support;
+
+use MintyPHP\App\AppContainer;
+use MintyPHP\Http\RequestContext;
+use RuntimeException;
+
+final class CliAppBootstrap
+{
+    private static bool $booted = false;
+    private static ?AppContainer $container = null;
+
+    private function __construct()
+    {
+    }
+
+    public static function projectRoot(): string
+    {
+        return dirname(__DIR__, 3);
+    }
+
+    public static function bootstrap(string $channel = 'cli', string $path = 'bin/cli'): AppContainer
+    {
+        if (!self::$booted) {
+            $projectRoot = self::projectRoot();
+            chdir($projectRoot);
+
+            require_once $projectRoot . '/vendor/autoload.php';
+            require_once $projectRoot . '/config/config.php';
+            require_once $projectRoot . '/lib/Support/helpers.php';
+
+            /** @var AppContainer $container */
+            $container = require $projectRoot . '/lib/App/registerContainer.php';
+            setAppContainer($container);
+
+            self::$container = $container;
+            self::$booted = true;
+        }
+
+        RequestContext::start([
+            'channel' => $channel,
+            'method' => 'CLI',
+            'path' => $path,
+        ]);
+
+        if (!self::$container instanceof AppContainer) {
+            throw new RuntimeException('CLI app container bootstrap failed.');
+        }
+
+        return self::$container;
+    }
+}